GWIn
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gwin package
GWin on the command line (
gwin
)
Plotting the posteriors (
gwin_plot_posterior
)
Making a movie (
gwin_plot_movie
)
gwin_make_workflow
: A parameter estimation workflow generator
gwin_make_inj_workflow
: A parameter estimation workflow generator
GWIn
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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P
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R
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S
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T
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U
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V
|
W
A
acceptance_fraction (gwin.sampler.base.BaseMCMCSampler attribute)
(gwin.sampler.kombine.KombineSampler attribute)
acl (gwin.io.hdf.InferenceFile attribute)
add_config_opts_to_parser() (in module gwin.option_utils)
add_density_option_group() (in module gwin.option_utils)
add_inference_results_option_group() (in module gwin.option_utils)
add_low_frequency_cutoff_opt() (in module gwin.option_utils)
add_plot_posterior_option_group() (in module gwin.option_utils)
add_sampler_option_group() (in module gwin.option_utils)
add_scatter_option_group() (in module gwin.option_utils)
apply() (gwin.models.base.SamplingTransforms method)
apply_calibration() (gwin.calibration.CubicSpline method)
(gwin.calibration.Recalibrate method)
B
BaseDataModel (class in gwin.models.base_data)
BaseMCMCSampler (class in gwin.sampler.base)
BaseModel (class in gwin.models.base)
blobs (gwin.sampler.mcmc.MCMCSampler attribute)
burn_in() (gwin.sampler.kombine.KombineSampler method)
burn_in_iterations (gwin.io.hdf.InferenceFile attribute)
BurnIn (class in gwin.burn_in)
C
calculate_logevidence() (gwin.sampler.emcee.EmceePTSampler class method)
CallModel (class in gwin.models)
chain (gwin.sampler.emcee.EmceeEnsembleSampler attribute)
(gwin.sampler.emcee.EmceePTSampler attribute)
(gwin.sampler.kombine.KombineSampler attribute)
(gwin.sampler.mcmc.MCMCSampler attribute)
check_integrity() (in module gwin.io.hdf)
clear_chain() (gwin.sampler.emcee.EmceeEnsembleSampler method)
(gwin.sampler.emcee.EmceePTSampler method)
(gwin.sampler.kombine.KombineSampler method)
(gwin.sampler.mcmc.MCMCSampler method)
cmd (gwin.io.hdf.InferenceFile attribute)
comments (gwin.io.txt.InferenceTXTFile attribute)
compute_acfs() (gwin.sampler.base.BaseMCMCSampler class method)
(gwin.sampler.emcee.EmceePTSampler class method)
compute_acls() (gwin.sampler.base.BaseMCMCSampler class method)
(gwin.sampler.emcee.EmceePTSampler class method)
config_parser_from_cli() (in module gwin.option_utils)
construct_kde() (in module gwin.results.scatter_histograms)
copy() (gwin.io.hdf.InferenceFile method)
copy_metadata() (gwin.io.hdf.InferenceFile method)
create_axes_grid() (in module gwin.results.scatter_histograms)
create_density_plot() (in module gwin.results.scatter_histograms)
create_marginalized_hist() (in module gwin.results.scatter_histograms)
create_multidim_plot() (in module gwin.results.scatter_histograms)
CubicSpline (class in gwin.calibration)
current_params (gwin.models.base.BaseModel attribute)
current_stats (gwin.models.base.BaseModel attribute)
D
data (gwin.models.base_data.BaseDataModel attribute)
,
[1]
data_from_cli() (in module gwin.option_utils)
default_stats (gwin.models.base.BaseModel attribute)
delimiter (gwin.io.txt.InferenceTXTFile attribute)
det_cplx_loglr() (gwin.models.gaussian_noise.GaussianNoise method)
det_lognl() (gwin.models.gaussian_noise.GaussianNoise method)
det_optimal_snrsq() (gwin.models.gaussian_noise.GaussianNoise method)
E
EmceeEnsembleSampler (class in gwin.sampler.emcee)
EmceePTSampler (class in gwin.sampler.emcee)
evaluate() (gwin.burn_in.BurnIn method)
expected_parameters_from_cli() (in module gwin.option_utils)
extra_args_from_config() (gwin.models.base.BaseModel static method)
F
from_cli() (gwin.sampler.emcee.EmceeEnsembleSampler class method)
(gwin.sampler.emcee.EmceePTSampler class method)
(gwin.sampler.kombine.KombineSampler class method)
(gwin.sampler.mcmc.MCMCSampler class method)
from_config() (gwin.calibration.Recalibrate class method)
(gwin.models.base.BaseModel class method)
(gwin.models.base.SamplingTransforms class method)
(gwin.models.base_data.BaseDataModel class method)
(gwin.models.marginalized_gaussian_noise.MarginalizedGaussianNoise class method)
G
GaussianNoise (class in gwin.models.gaussian_noise)
gelman_rubin() (in module gwin.gelman_rubin)
get_current_stats() (gwin.models.base.BaseModel method)
get_file_type() (in module gwin.option_utils)
get_scale_fac() (in module gwin.results.scatter_histograms)
get_slice() (gwin.io.hdf.InferenceFile method)
getstats() (gwin.models.base.ModelStats method)
getstatsdict() (gwin.models.base.ModelStats method)
geweke() (in module gwin.geweke)
gwin (module)
gwin.burn_in (module)
gwin.calibration (module)
gwin.entropy (module)
gwin.gelman_rubin (module)
gwin.geweke (module)
gwin.io (module)
gwin.io.hdf (module)
gwin.io.txt (module)
gwin.models (module)
gwin.models.analytic (module)
gwin.models.base (module)
gwin.models.base_data (module)
gwin.models.gaussian_noise (module)
gwin.models.marginalized_gaussian_noise (module)
gwin.option_utils (module)
gwin.results (module)
gwin.results.scatter_histograms (module)
gwin.sampler (module)
gwin.sampler.base (module)
gwin.sampler.emcee (module)
gwin.sampler.kombine (module)
gwin.sampler.mcmc (module)
gwin.utils (module)
gwin.utils.sphinx (module)
gwin.workflow (module)
H
half_chain() (in module gwin.burn_in)
I
InferenceFile (class in gwin.io.hdf)
InferenceTXTFile (class in gwin.io.txt)
injections_from_cli() (in module gwin.option_utils)
is_burned_in (gwin.io.hdf.InferenceFile attribute)
K
kl() (in module gwin.entropy)
KombineSampler (class in gwin.sampler.kombine)
ks_test() (in module gwin.burn_in)
L
lnpost (gwin.sampler.emcee.EmceeEnsembleSampler attribute)
(gwin.sampler.emcee.EmceePTSampler attribute)
(gwin.sampler.kombine.KombineSampler attribute)
(gwin.sampler.mcmc.MCMCSampler attribute)
log_evidence (gwin.io.hdf.InferenceFile attribute)
logjacobian (gwin.models.base.BaseModel attribute)
logjacobian() (gwin.models.base.SamplingTransforms method)
loglikelihood (gwin.models.base.BaseModel attribute)
loglr (gwin.models.base_data.BaseDataModel attribute)
,
[1]
lognl (gwin.io.hdf.InferenceFile attribute)
(gwin.models.base_data.BaseDataModel attribute)
,
[1]
logplr (gwin.models.base_data.BaseDataModel attribute)
,
[1]
logposterior (gwin.models.base.BaseModel attribute)
logprior (gwin.models.base.BaseModel attribute)
low_frequency_cutoff_from_cli() (in module gwin.option_utils)
M
make_inference_1d_posterior_plots() (in module gwin.workflow)
make_inference_acceptance_rate_plot() (in module gwin.workflow)
make_inference_inj_plots() (in module gwin.workflow)
make_inference_posterior_plot() (in module gwin.workflow)
make_inference_prior_plot() (in module gwin.workflow)
make_inference_samples_plot() (in module gwin.workflow)
make_inference_summary_table() (in module gwin.workflow)
map_to_adjust() (gwin.calibration.Recalibrate method)
MarginalizedGaussianNoise (class in gwin.models.marginalized_gaussian_noise)
max_posterior() (in module gwin.burn_in)
MCMCSampler (class in gwin.sampler.mcmc)
model_name (gwin.io.hdf.InferenceFile attribute)
model_stats (gwin.sampler.base.BaseMCMCSampler attribute)
(gwin.sampler.emcee.EmceePTSampler attribute)
ModelStats (class in gwin.models.base)
N
n_acl() (in module gwin.burn_in)
n_independent_samples (gwin.io.hdf.InferenceFile attribute)
n_independent_samples() (gwin.sampler.base.BaseMCMCSampler class method)
name (gwin.calibration.CubicSpline attribute)
(gwin.calibration.Recalibrate attribute)
(gwin.io.hdf.InferenceFile attribute)
(gwin.io.txt.InferenceTXTFile attribute)
(gwin.models.analytic.TestEggbox attribute)
(gwin.models.analytic.TestNormal attribute)
(gwin.models.analytic.TestRosenbrock attribute)
(gwin.models.analytic.TestVolcano attribute)
(gwin.models.base.BaseModel attribute)
(gwin.models.gaussian_noise.GaussianNoise attribute)
(gwin.models.marginalized_gaussian_noise.MarginalizedGaussianNoise attribute)
(gwin.sampler.base.BaseMCMCSampler attribute)
(gwin.sampler.emcee.EmceeEnsembleSampler attribute)
(gwin.sampler.emcee.EmceePTSampler attribute)
(gwin.sampler.kombine.KombineSampler attribute)
(gwin.sampler.mcmc.MCMCSampler attribute)
niterations (gwin.io.hdf.InferenceFile attribute)
(gwin.sampler.mcmc.MCMCSampler attribute)
ntemps (gwin.io.hdf.InferenceFile attribute)
(gwin.sampler.emcee.EmceePTSampler attribute)
nwalkers (gwin.io.hdf.InferenceFile attribute)
(gwin.sampler.base.BaseMCMCSampler attribute)
P
p0 (gwin.sampler.base.BaseMCMCSampler attribute)
,
[1]
(gwin.sampler.mcmc.MCMCSampler attribute)
parse_parameters_opt() (in module gwin.option_utils)
plot_ranges_from_cli() (in module gwin.option_utils)
pos (gwin.sampler.base.BaseMCMCSampler attribute)
,
[1]
posterior_only (gwin.io.hdf.InferenceFile attribute)
posterior_step() (in module gwin.burn_in)
prior_from_config() (gwin.models.base.BaseModel static method)
prior_rvs() (gwin.models.base.BaseModel method)
Properties (gwin.models.base_data.BaseDataModel attribute)
R
read_acceptance_fraction() (gwin.io.hdf.InferenceFile method)
(gwin.sampler.base.BaseMCMCSampler static method)
(gwin.sampler.emcee.EmceePTSampler static method)
read_acls() (gwin.io.hdf.InferenceFile method)
(gwin.sampler.base.BaseMCMCSampler static method)
read_from_config() (in module gwin.models)
read_label() (gwin.io.hdf.InferenceFile method)
read_model_stats() (gwin.io.hdf.InferenceFile method)
read_random_state() (gwin.io.hdf.InferenceFile method)
read_samples() (gwin.io.hdf.InferenceFile method)
(gwin.sampler.base.BaseMCMCSampler class method)
(gwin.sampler.emcee.EmceePTSampler class method)
read_sampling_params_from_config() (in module gwin.models.base)
Recalibrate (class in gwin.calibration)
reduce_ticks() (in module gwin.results.scatter_histograms)
remove_common_offset() (in module gwin.results.scatter_histograms)
results_from_cli() (in module gwin.option_utils)
resume_points (gwin.io.hdf.InferenceFile attribute)
rst_dict_table() (in module gwin.utils.sphinx)
run() (gwin.sampler.emcee.EmceeEnsembleSampler method)
(gwin.sampler.emcee.EmceePTSampler method)
(gwin.sampler.kombine.KombineSampler method)
(gwin.sampler.mcmc.MCMCSampler method)
S
sampler (gwin.sampler.base.BaseMCMCSampler attribute)
,
[1]
sampler_class (gwin.io.hdf.InferenceFile attribute)
sampler_from_cli() (in module gwin.option_utils)
sampler_group (gwin.io.hdf.InferenceFile attribute)
sampler_name (gwin.io.hdf.InferenceFile attribute)
samples (gwin.sampler.base.BaseMCMCSampler attribute)
samples_group (gwin.io.hdf.InferenceFile attribute)
samples_parser (gwin.io.hdf.InferenceFile attribute)
sampling_params (gwin.io.hdf.InferenceFile attribute)
(gwin.models.base.BaseModel attribute)
SamplingTransforms (class in gwin.models.base)
set_marginal_histogram_title() (in module gwin.results.scatter_histograms)
set_p0() (gwin.sampler.base.BaseMCMCSampler method)
(gwin.sampler.emcee.EmceeEnsembleSampler method)
(gwin.sampler.emcee.EmceePTSampler method)
set_state_from_file() (gwin.sampler.emcee.EmceeEnsembleSampler method)
(gwin.sampler.kombine.KombineSampler method)
setup_foreground_inference() (in module gwin.workflow)
static_params (gwin.io.hdf.InferenceFile attribute)
(gwin.models.base.BaseModel attribute)
statnames (gwin.models.base.ModelStats attribute)
stats_group (gwin.io.hdf.InferenceFile attribute)
T
TestEggbox (class in gwin.models.analytic)
TestNormal (class in gwin.models.analytic)
TestRosenbrock (class in gwin.models.analytic)
TestVolcano (class in gwin.models.analytic)
U
update() (gwin.burn_in.BurnIn method)
(gwin.models.base.BaseModel method)
use_sampler() (in module gwin.burn_in)
V
validate_checkpoint_files() (in module gwin.option_utils)
variable_params (gwin.io.hdf.InferenceFile attribute)
(gwin.models.base.BaseModel attribute)
W
walk() (in module gwin.gelman_rubin)
waveform_generator (gwin.models.base_data.BaseDataModel attribute)
,
[1]
write() (gwin.io.txt.InferenceTXTFile class method)
write_acceptance_fraction() (gwin.sampler.base.BaseMCMCSampler method)
(gwin.sampler.emcee.EmceePTSampler method)
(gwin.sampler.mcmc.MCMCSampler method)
write_acls() (gwin.sampler.base.BaseMCMCSampler static method)
write_chain() (gwin.sampler.base.BaseMCMCSampler method)
write_command_line() (gwin.io.hdf.InferenceFile method)
write_data() (gwin.io.hdf.InferenceFile method)
write_injections() (gwin.io.hdf.InferenceFile method)
write_metadata() (gwin.sampler.base.BaseMCMCSampler method)
(gwin.sampler.emcee.EmceePTSampler method)
write_model_stats() (gwin.sampler.base.BaseMCMCSampler method)
write_psd() (gwin.io.hdf.InferenceFile method)
write_random_state() (gwin.io.hdf.InferenceFile method)
write_results() (gwin.sampler.base.BaseMCMCSampler method)
(gwin.sampler.emcee.EmceeEnsembleSampler method)
(gwin.sampler.emcee.EmceePTSampler method)
write_resume_point() (gwin.io.hdf.InferenceFile method)
write_samples_group() (gwin.sampler.base.BaseMCMCSampler static method)
(gwin.sampler.emcee.EmceePTSampler static method)
write_state() (gwin.sampler.emcee.EmceeEnsembleSampler method)
(gwin.sampler.kombine.KombineSampler method)
write_stilde() (gwin.io.hdf.InferenceFile method)
write_strain() (gwin.io.hdf.InferenceFile method)
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